Phatr_hclust_0177 Hierarchical Clustering
Phaeodactylum tricornutum
| Cluster Plot | Conditions Plot | Dendrogram |
|---|---|---|
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| GO ID | Go Term | p-value | q-value | Cluster |
|---|---|---|---|---|
| GO:0006779 | porphyrin biosynthesis | 0.00000000145 | 0.0000046 | Phatr_hclust_0177 |
| GO:0015995 | chlorophyll biosynthesis | 0.000109405 | 0.344515 | Phatr_hclust_0177 |
| GO:0015979 | photosynthesis | 0.00021798 | 0.683369 | Phatr_hclust_0177 |
| GO:0030494 | bacteriochlorophyll biosynthesis | 0.00617436 | 1 | Phatr_hclust_0177 |
| GO:0006725 | aromatic compound metabolism | 0.00649705 | 1 | Phatr_hclust_0177 |
| GO:0016117 | carotenoid biosynthesis | 0.0184135 | 1 | Phatr_hclust_0177 |
| GO:0006118 | electron transport | 0.049437 | 1 | Phatr_hclust_0177 |
| GO:0006457 | protein folding | 0.161817 | 1 | Phatr_hclust_0177 |
| GO:0009765 | photosynthesis light harvesting | 0.215486 | 1 | Phatr_hclust_0177 |
| GO:0009058 | biosynthesis | 0.244396 | 1 | Phatr_hclust_0177 |
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PHATRDRAFT_10640 : chloroplast coproporphyrinogen iii oxidase (PLN02873) |
PHATRDRAFT_45238 : uncharacterized conserved protein (SPOUT_MTase superfamily) |
PHATRDRAFT_7626 : fkbp-type peptidyl-prolyl cis-trans isomerase (FKBP_C) |
PHATRDRAFT_51811 : porphobilinogen deaminase (hemC) |
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PHATRDRAFT_14808 : nud24_arath nudix hydrolasechloroplast precursor (Nudix_Hydrolase superfamily) |
PHATRDRAFT_50411 : pentatricopeptiderepeat-containing protein (PPR_2) |
PHATRDRAFT_9210 : cog1233: phytoene dehydrogenase and related proteins (COG1233) |
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PHATRDRAFT_44529 : (DUF1995 superfamily) |
PHATRDRAFT_52655 : glutamate-trna ligase (PLN02627) |
PHATRDRAFT_20757 : uroporphyrinogen decarboxylase (URO-D) |
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PHATRDRAFT_49437 : nad dependent epimerase dehydratase familyexpressed (NADB_Rossmann superfamily) |
PHATRDRAFT_13265 : (PLN03069) |
PHATRDRAFT_43737 : phytanoyl-dioxygenase (PhyH superfamily) |
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PHATRDRAFT_8987 : mitochondrial phosphate transport protein (Mito_carr) |
PHATRDRAFT_16545 : methionyl-trna synthetase (tRNA_bind_EMAP-II_like) |
PHATRDRAFT_45845 : zeaxanthin epoxidase precursor (PRK06847) |
PHATRDRAFT_16322 : fucoxanthin chlorophyll a c binding protein (Chloroa_b-bind superfamily) |
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PHATRDRAFT_36362 : peptidylprolyl isomerase (FKBP_C) |
PHATRDRAFT_31109 : plastid protoporphyrinogen oxidase (PLN02576) |
PHATRDRAFT_36347 : glutamate-1-semialdehyde aminotransferase (PRK00062) |
PHATRDRAFT_15980 : tetrapyrrole-binding protein (GUN4 superfamily) |
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PHATRDRAFT_31683 : chloroplast geranylgeranyl reductase hydrogenase (PLN00093) |
PHATRDRAFT_12807 : chlorophyll synthetase (PT_UbiA_chlorophyll) |
PHATRDRAFT_33017 : mg chelatase subunit (Cob-chelat-sub) |
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PHATRDRAFT_42982 : fg-gap repeat family protein |
PHATRDRAFT_22819 : peroxisomal membrane (Mpv17_PMP22) |
PHATRDRAFT_15068 : chloroplast coproporphyrinogen iii oxidase (PLN02873) |
| Condition | Condition | Difference | FDR |
|---|---|---|---|
| Re-illuminated_6h | Re-illuminated_6h | 0.699 | 0.000505051 |
| Copper_SH | Copper_SH | -0.600 | 0.000515464 |
| Green_vs_Red_24h | Green_vs_Red_24h | 0.327 | 0.0075 |
| Silver_SH | Silver_SH | 0.065 | 0.424684 |
| Cadmium_1.2mg | Cadmium_1.2mg | -0.080 | 0.211429 |
| BlueLight_24h | BlueLight_24h | -0.278 | 0.0145833 |
| GreenLight_0.5h | GreenLight_0.5h | 0.041 | 0.926989 |
| RedLight_6h | RedLight_6h | 0.267 | 0.163559 |
| light_16hr_dark_7.5hr | light_16hr_dark_7.5hr | 0.000 | 0.980594 |
| GreenLight_24h | GreenLight_24h | 0.167 | 0.18736 |
| light_6hr | light_6hr | 2.211 | 0.000561798 |
| dark_8hr_light_3hr | dark_8hr_light_3hr | 1.888 | 0.00060241 |
| Blue_vs_Green_6h | Blue_vs_Green_6h | 0.275 | 0.00128205 |
| Ammonia_SH | Ammonia_SH | -0.545 | 0.0219298 |
| Simazine_SH | Simazine_SH | -1.375 | 0.000423729 |
| Oil_SH | Oil_SH | -0.211 | 0.0297753 |
| Salinity_15ppt_SH | Salinity_15ppt_SH | -0.411 | 0.000609756 |
| Cadmium_SH | Cadmium_SH | -0.150 | 0.144595 |
| Blue_vs_Red_24h | Blue_vs_Red_24h | -0.118 | 0.364256 |
| highlight_0to6h | highlight_0to6h | -0.646 | 0.000806452 |
| BlueLight_0.5h | BlueLight_0.5h | -2.886 | 0.000462963 |
| Dispersant_SH | Dispersant_SH | 0.236 | 0.0208904 |
| light_16hr_dark_4hr | light_16hr_dark_4hr | -0.704 | 0.000943396 |
| light_15.5hr | light_15.5hr | -1.561 | 0.000625 |
| light_10.5hr | light_10.5hr | 0.621 | 0.00183486 |
| Dispersed_oil_SH | Dispersed_oil_SH | 0.000 | 1 |
| Si_free | Si_free | 0.076 | 0.480702 |
| Re-illuminated_0.5h | Re-illuminated_0.5h | -0.951 | 0.00268456 |
| Mixture_SH | Mixture_SH | -0.638 | 0.00789474 |
| Blue_vs_Red_6h | Blue_vs_Red_6h | 0.393 | 0.0163793 |
| light_16hr_dark_30min | light_16hr_dark_30min | -2.445 | 0.000735294 |
| BlueLight_6h | BlueLight_6h | 0.660 | 0.000581395 |
| highlight_12to48h | highlight_12to48h | 0.613 | 0.000555556 |
| RedLight_24h | RedLight_24h | -0.160 | 0.254873 |
| Dark_treated | Dark_treated | -4.888 | 0.000446429 |
| GreenLight_6h | GreenLight_6h | 0.385 | 0.00897436 |
| Cadmium_0.12mg | Cadmium_0.12mg | -0.114 | 0.00185185 |
| Blue_vs_Green_24h | Blue_vs_Green_24h | -0.445 | 0.00135135 |
| RedLight_0.5h | RedLight_0.5h | -0.639 | 0.0401198 |
| Green_vs_Red_6h | Green_vs_Red_6h | 0.118 | 0.547899 |
| Re-illuminated_24h | Re-illuminated_24h | -0.038 | 0.811023 |
