PHATRDRAFT_17487 gamma hydroxybutyrate dehydrogenase-like protein (MmsB)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_17487 chr_1 gamma hydroxybutyrate dehydrogenase-like protein (MmsB) 1022696 1023724 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0244

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0102
 0.21

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAD_binding_2 NAD binding domain of 6-phosphogluconate dehydrogenase; The NAD binding domain of 6-... cl19126 117.554 8.39E-32 4 - 167 specific 251959
F420_oxidored superfamily NADP oxidoreductase coenzyme F420-dependent; NADP oxidoreductase coenzyme F420-dependent. - 117.554 8.39E-32 4 - 167 superfamily 267479
NAD_binding_11 superfamily NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase; 3-Hydroxyisobutyrate is a central... - 90.9986 9.72E-23 177 - 296 superfamily 258970
NAD_binding_11 superfamily NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase; 3-Hydroxyisobutyrate is a central... - 90.9986 9.72E-23 177 - 296 superfamily 258970
MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] - 221.308 5.63E-70 4 - 300 multi-dom 224995

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
2669 Not available 180727 201728 252918 Cre11.g467617.t1.1 AT1G17650.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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