PHATRDRAFT_8659 adp-ribosylation factor 3 (Arl1)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_8659	chr_1	adp-ribosylation factor 3 (Arl1)	1282494	1283124	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0189

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0091	0.41

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Arl1		ADP ribosylation factor 1 (Arf1); Arl1 subfamily. Arl1 (Arf-like 1) localizes to the Golgi complex...	cl17170	298.553	5.95E-104	19 - 176	specific	206718
Ras_like_GTPase superfamily		Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase...	-	298.553	5.95E-104	19 - 176	superfamily	266525
COG1100		GTPase SAR1 and related small G proteins [General function prediction only]	-	101.191	1.66E-26	13 - 179	multi-dom	224025

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
37988		Not available	186009	300375	Not available	Cre12.g535900.t1.1	AT2G24765.1	314739

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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