PHATRDRAFT_31980 trna-specific adenosine deaminase (A_deamin superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_31980	chr_1	trna-specific adenosine deaminase (A_deamin superfamily)	1394204	1395285	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0091

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0044	0.37	0.52 2200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
A_deamin superfamily		Adenosine-deaminase (editase) domain; Adenosine deaminases acting on RNA (ADARs) can deaminate...	-	171.407	1.66E-49	3 - 328	superfamily	261397

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21439		Not available	253593	264503	114062	Not available	AT1G01760.1	532829

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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