PHATRDRAFT_24772 alpha-isopropylmalate isomerase (IPMI)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_24772 chr_1 alpha-isopropylmalate isomerase (IPMI) 1492729 1495287 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0148

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0124
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
IPMI 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-... cl00285 560.655 0 66 - 503 specific 153133
Aconitase superfamily Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and... - 560.655 0 66 - 503 superfamily 260326
IPMI_Swivel Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins... cl00215 132.327 3.56E-36 578 - 718 specific 238809
Aconitase_swivel superfamily Aconitase swivel domain. Aconitase (aconitate hydratase) catalyzes the reversible isomerization of... - 132.327 3.56E-36 578 - 718 superfamily 260268
h_aconitase homoaconitase; Homoaconitase is known only as a fungal enzyme from two species, where it is part of... - 199.881 1.75E-54 40 - 715 multi-dom 129245

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
42704 Not available 223273 206349 421960 Cre01.g004500.t1.2 AT4G13430.1 562967

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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