PHATRDRAFT_9210 cog1233: phytoene dehydrogenase and related proteins (COG1233)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_9210	chr_1	cog1233: phytoene dehydrogenase and related proteins (COG1233)	1892763	1894441	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0177

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0140	0.20	240 21000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NAD_binding_8 superfamily		NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain.	-	199.648	4.53E-57	1 - 505	superfamily	267487
COG1233		Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and...	-	204.205	7.50E-59	1 - 507	multi-dom	224154

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
10233		Not available	206818	238122	436908	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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