PHATRDRAFT_43251 adp-ribosylation factor (Arf1_5_like)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43251	chr_1	adp-ribosylation factor (Arf1_5_like)	2447749	2448706	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0194

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0024	0.42	0.018 2.9

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Arf1_5_like		ADP-ribosylation factor-1 (Arf1) and ADP-ribosylation factor-5 (Arf5); The Arf1-Arf5-like subfamily...	cl17170	334.761	2.52E-118	18 - 178	specific	206717
Ras_like_GTPase superfamily		Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase...	-	334.761	2.52E-118	18 - 178	superfamily	266525
COG1100		GTPase SAR1 and related small G proteins [General function prediction only]	-	117.369	1.67E-32	13 - 138	multi-dom	224025

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
39299		Not available	177131	251778	79310	Cre12.g486250.t1.2	AT1G10630.1	354140

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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