PHATRDRAFT_46408 trna pseudouridine synthase a (PseudoU_synth superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46408	chr_10	trna pseudouridine synthase a (PseudoU_synth superfamily)	241750	242793	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0213

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PseudoU_synth superfamily		Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to...	-	207.326	9.57E-65	41 - 339	superfamily	260207
TruA		Pseudouridylate synthase [Translation, ribosomal structure and biogenesis]	-	194.023	2.88E-59	36 - 344	multi-dom	223179

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
264420		Not available	151702	325285	219207	Cre13.g591501.t1.1	AT3G06950.1	293355

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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