PHATRDRAFT_46460 (DnaQ_like_exo superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46460	chr_10	(DnaQ_like_exo superfamily)	401549	405895	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0107

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0249	0.32	29000 800000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DnaQ_like_exo superfamily		DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like...	-	230.196	1.06E-68	1244 - 1413	superfamily	263941
Peptidase_C19 superfamily		Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove...	-	63.5926	7.22E-11	742 - 1007	superfamily	261337
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	49.6408	2.39E-06	304 - 430	superfamily	238121

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268896		Not available	188237	188895	231780	Cre06.g304550.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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