PHATRDRAFT_3832 glycoside hydrolase family 2 tim barrel (Glyco_hydro_2_C superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_3832 chr_10 glycoside hydrolase family 2 tim barrel (Glyco_hydro_2_C superfamily) 792656 793967 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0492

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Glyco_hydro_2_C superfamily Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, beta-... - 223.426 3.15E-70 142 - 349 superfamily 251563
Glyco_hydro_2 superfamily Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and beta-... - 66.3881 8.93E-14 30 - 140 superfamily 250069
Glyco_hydro_2 superfamily Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and beta-... - 66.3881 8.93E-14 30 - 140 superfamily 250069
Glyco_hydro_2_N superfamily Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, beta-... - 44.9416 3.97E-06 1 - 24 superfamily 251564

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
263381 Not available Not available 230919 429204 Cre08.g379450.t1.1 AT3G54440.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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