Phatr_hclust_0492 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0006635 fatty acid beta-oxidation 0.00222277 1 Phatr_hclust_0492
GO:0009306 protein secretion 0.00444115 1 Phatr_hclust_0492
GO:0005975 carbohydrate metabolism 0.00799548 1 Phatr_hclust_0492
GO:0006605 protein targeting 0.0132709 1 Phatr_hclust_0492
GO:0030001 metal ion transport 0.0350414 1 Phatr_hclust_0492
GO:0006813 potassium ion transport 0.0436294 1 Phatr_hclust_0492
GO:0006886 intracellular protein transport 0.0855585 1 Phatr_hclust_0492
GO:0006396 RNA processing 0.117917 1 Phatr_hclust_0492

Members

PHATRDRAFT_30909 :
PHATRDRAFT_41008 :
PHATRDRAFT_43651 :
PHATRDRAFT_42836 : at3g07720 f17a17_6 (PLN02193)
PHATRDRAFT_44781 :
PHATRDRAFT_36575 : beta-galactosidase (Glyco_hydro_2_N superfamily)
PHATRDRAFT_5405 : abc-type uncharacterized transport system atpase component-like (ABC_ATPase superfamily)
PHATRDRAFT_48305 :
PHATRDRAFT_45427 : (MttA_Hcf106 superfamily)
PHATRDRAFT_3832 : glycoside hydrolase family 2 tim barrel (Glyco_hydro_2_C superfamily)
PHATRDRAFT_51406 : myst histone acetyltransferaseisoform cra_b (PLN03238)
PHATRDRAFT_50318 : myb4r1 (myb domain protein 4r1) transcription factor
PHATRDRAFT_43655 : guanine nucleotide-binding protein beta subunit-like protein 1 (g protein beta subunit-like protein 1) (wd40 repeat-containing protein deleted in vcfs) (wdvcf protein) (WD40 superfamily)
PHATRDRAFT_33610 : trna- trna (PcnB)
PHATRDRAFT_43741 :
PHATRDRAFT_19979 : peroxisomal acyl-coenzyme a oxidase (ACAD superfamily)
PHATRDRAFT_45426 :
PHATRDRAFT_46169 : micro-fibrillar-associated protein 1 c-terminus containing protein (Prp19_bind)
PHATRDRAFT_49267 :
PHATRDRAFT_49400 : divalent heavy-metal cation transporter (COG0428)
PHATRDRAFT_36598 :
PHATRDRAFT_46951 :

Conditions

Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h 0.230 0.278767
Copper_SH Copper_SH -0.319 0.00544872
Green_vs_Red_24h Green_vs_Red_24h -0.062 0.624179
Silver_SH Silver_SH 0.215 0.0310427
Cadmium_1.2mg Cadmium_1.2mg 0.034 0.737746
BlueLight_24h BlueLight_24h -0.064 0.818132
GreenLight_0.5h GreenLight_0.5h 0.281 0.505205
RedLight_6h RedLight_6h 0.073 0.759767
light_16hr_dark_7.5hr light_16hr_dark_7.5hr 0.000 0.980594
GreenLight_24h GreenLight_24h 0.010 0.965833
light_6hr light_6hr -0.041 0.888305
dark_8hr_light_3hr dark_8hr_light_3hr 0.097 0.681965
Blue_vs_Green_6h Blue_vs_Green_6h 0.009 0.947752
Ammonia_SH Ammonia_SH -0.166 0.548739
Simazine_SH Simazine_SH 0.099 0.391337
Oil_SH Oil_SH 0.026 0.808932
Salinity_15ppt_SH Salinity_15ppt_SH -0.230 0.0635983
Cadmium_SH Cadmium_SH 0.030 0.807281
Blue_vs_Red_24h Blue_vs_Red_24h -0.136 0.367944
highlight_0to6h highlight_0to6h 0.097 0.611818
BlueLight_0.5h BlueLight_0.5h 0.297 0.557995
Dispersant_SH Dispersant_SH 0.224 0.05
light_16hr_dark_4hr light_16hr_dark_4hr -0.330 0.0140777
light_15.5hr light_15.5hr -0.666 0.00436893
light_10.5hr light_10.5hr -0.332 0.201527
Dispersed_oil_SH Dispersed_oil_SH -0.068 0.514217
Si_free Si_free 0.049 0.679939
Re-illuminated_0.5h Re-illuminated_0.5h 0.473 0.290681
Mixture_SH Mixture_SH -0.419 0.146106
Blue_vs_Red_6h Blue_vs_Red_6h 0.001 0.9999
light_16hr_dark_30min light_16hr_dark_30min -0.565 0.0170732
BlueLight_6h BlueLight_6h 0.074 0.693917
highlight_12to48h highlight_12to48h -0.139 0.504472
RedLight_24h RedLight_24h 0.072 0.68236
Dark_treated Dark_treated 0.711 0.231132
GreenLight_6h GreenLight_6h 0.065 0.75047
Cadmium_0.12mg Cadmium_0.12mg 0.032 0.483333
Blue_vs_Green_24h Blue_vs_Green_24h -0.074 0.364356
RedLight_0.5h RedLight_0.5h 0.323 0.434718
Green_vs_Red_6h Green_vs_Red_6h -0.008 0.968763
Re-illuminated_24h Re-illuminated_24h 0.051 0.772995

Motifs

MEME Output