PHATRDRAFT_13331 peptidase s41a (prc)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_13331 chr_11 peptidase s41a (prc) 134039 135079 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0112

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0229
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_S41_CPP C-terminal processing peptidase; serine protease family S41; The C-terminal processing peptidase (... cl02526 178.76 4.02E-54 181 - 343 specific 143476
Peptidase_S41 superfamily C-terminal processing peptidase family S41; Peptidase family S41 (C-terminal processing peptidase... - 178.76 4.02E-54 181 - 343 superfamily 261325
PDZ_CTP_protease PDZ domain of C-terminal processing-, tail-specific-, and tricorn proteases, which function in... cl00117 61.0876 4.54E-12 78 - 163 specific 238488
PDZ superfamily PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif).... - 61.0876 4.54E-12 78 - 163 superfamily 260201
Tricorn_C1 superfamily Tricorn protease C1 domain; This domain is the C1 core domain of tricorn protease. This is a mixed... - 44.0332 3.11E-06 6 - 64 superfamily 258822
prc C-terminal peptidase (prc); A C-terminal peptidase with different substrates in different species... - 247.274 5.05E-79 29 - 344 multi-dom 232883

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264184 Not available 184543 204439 315400 Not available AT4G17740.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments