PHATRDRAFT_13281 mgc83122 protein (NIP7)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13281	chr_11	mgc83122 protein (NIP7)	454483	455028	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0243

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0192	0.20	0.69 12

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NIP7		Protein involved in ribosomal biogenesis, contains PUA domain [Translation, ribosomal structure and...	cl00607	164.125	4.96E-51	1 - 174	specific	224293
PUA superfamily		PUA domain; The PUA domain named after Pseudouridine synthase and Archaeosine transglycosylase, was...	-	164.125	4.96E-51	1 - 174	superfamily	260527

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
39003		Not available	256734	291745	431202	Cre12.g528900.t1.1	AT4G15770.1	352017

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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