PHATRDRAFT_46971 xpg-like endonuclease cg10670-pa (PIN_SF superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46971	chr_12	xpg-like endonuclease cg10670-pa (PIN_SF superfamily)	44406	46496	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0222

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0002	0.43	470 780

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PIN_SF superfamily		PIN (PilT N terminus) domain: Superfamily; PIN_SF The PIN (PilT N terminus) domain belongs to a...	-	120.554	1.04E-30	64 - 219	superfamily	265458
H3TH_StructSpec-5'-nucleases superfamily		H3TH domains of structure-specific 5' nucleases (or flap endonuclease-1-like) involved in...	-	56.5922	8.66E-10	241 - 377	superfamily	265460

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262795		Not available	136790	169767	Not available	Not available	AT1G01880.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments