PHATRDRAFT_3425 trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase (tRNA_Me_trans)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_3425	chr_14	trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase (tRNA_Me_trans)	616520	617869	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0216

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0127	0.23	1.1 59

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
tRNA_Me_trans		tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-...	cl00292	329.097	6.50E-110	1 - 378	specific	238956
AANH_like superfamily		Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases...	-	329.097	6.50E-110	1 - 378	superfamily	260331
tRNA_Me_trans		tRNA methyl transferase; This family represents tRNA(5-methylaminomethyl-2-thiouridine)-...	-	338.068	2.01E-113	1 - 379	multi-dom	251696

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
269988		Not available	205230	234685	437795	Not available	Not available	563700

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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