PHATRDRAFT_21882 vacuolar-atpase c subunit (V_ATP_synt_C)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_21882	chr_14	vacuolar-atpase c subunit (V_ATP_synt_C)	682414	683035	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0096

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0147	0.26	220 7400

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
V_ATP_synt_C		vacuolar ATP synthase 16 kDa proteolipid subunit; This model describes the vacuolar ATP synthase 16...	cl00466	140.599	7.03E-43	14 - 125	specific	130170
ATP-synt_C superfamily		ATP synthase subunit C; ATP synthase subunit C.	-	53.6129	1.31E-10	97 - 162	superfamily	260442
ATP-synt_C		ATP synthase subunit C; ATP synthase subunit C.	cl00466	53.6129	1.31E-10	97 - 162	specific	249620
ATP-synt_C superfamily		ATP synthase subunit C; ATP synthase subunit C.	-	53.6129	1.31E-10	97 - 162	superfamily	260442

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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