PHATRDRAFT_14552 trna-ia37 thiotransferase enzyme (PRK14333)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_14552 chr_15 trna-ia37 thiotransferase enzyme (PRK14333) 183658 185019 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0118

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0051
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Radical_SAM superfamily Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and... - 62.3509 1.51E-11 157 - 360 superfamily 100105
Radical_SAM superfamily Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and... - 62.3509 1.51E-11 157 - 360 superfamily 100105
UPF0004 superfamily Uncharacterized protein family UPF0004; This family is the N terminal half of the Prosite family.... - 128.773 5.88E-36 3 - 104 superfamily 250224
UPF0004 superfamily Uncharacterized protein family UPF0004; This family is the N terminal half of the Prosite family.... - 128.773 5.88E-36 3 - 104 superfamily 250224
TRAM TRAM domain; This small domain has no known function. However it may perform a nucleic acid binding... cl01282 57.6257 8.52E-11 385 - 445 specific 110897
TRAM superfamily TRAM domain; This small domain has no known function. However it may perform a nucleic acid binding... - 57.6257 8.52E-11 385 - 445 superfamily 242412
PRK14333 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional - 649.804 0 3 - 445 multi-dom 237677

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
41246 Not available 148212 224359 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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