PHATRDRAFT_14457 mgc107891 protein (rpa1)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_14457 chr_15 mgc107891 protein (rpa1) 631178 633225 +
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0132
Normalized Mean Residue
Phatr_bicluster_0105
0.29
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RPA1_DBD_A RPA1_DBD_A: A subfamily of OB folds corresponding to the second OB fold, the ssDNA-binding domain (... cl09930 152.015 8.22E-44 164 - 265 specific 239920
RPA_2b-aaRSs_OBF_like superfamily Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with... - 103.431 2.55E-26 4 - 89 superfamily 263924
RPA1_DBD_C RPA1_DBD_C: A subfamily of OB folds corresponding to the C-terminal OB fold, the ssDNA-binding... cl09930 133.202 3.20E-36 426 - 605 specific 239922
RPA_2b-aaRSs_OBF_like superfamily Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with... - 103.431 2.55E-26 4 - 89 superfamily 263924
RPA1_DBD_B RPA1_DBD_B: A subfamily of OB folds corresponding to the third OB fold, the ssDNA-binding domain (... cl09930 114.604 3.19E-30 294 - 393 specific 239921
RPA_2b-aaRSs_OBF_like superfamily Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with... - 103.431 2.55E-26 4 - 89 superfamily 263924
RPA1N RPA1N: A subfamily of OB folds corresponding to the N-terminal OB-fold domain of human RPA1 (also... cl09930 103.431 2.55E-26 4 - 89 specific 239923
RPA_2b-aaRSs_OBF_like superfamily Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with... - 103.431 2.55E-26 4 - 89 superfamily 263924
rpa1 replication factor-a protein 1 (rpa1); All proteins in this family for which functions are known... - 473.833 1.19E-159 12 - 605 multi-dom 233055
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
263415 Not available 211019 287183 469065 Cre17.g718850.t1.1 AT2G06510.1 556228
KEGG description KEGG Pathway
Not available Not available
Not available -
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