PHATRDRAFT_48136 (CAF1A)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48136	chr_16	(CAF1A)	299631	303974	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0193

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0044	0.37	0.52 2200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CAF1A superfamily		Chromatin assembly factor 1 subunit A; The CAF-1 or chromatin assembly factor-1 consists of three...	-	99.2266	3.39E-24	959 - 1016	superfamily	256933
CAF1A superfamily		Chromatin assembly factor 1 subunit A; The CAF-1 or chromatin assembly factor-1 consists of three...	-	99.2266	3.39E-24	959 - 1016	superfamily	256933
tolA_full		TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the outer...	-	53.6863	1.51E-07	712 - 832	multi-dom	234017

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
20903		Not available	262591	306340	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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