20903 CAF1A
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20903 chr_1 CAF1A 1905987 1910788 - CAF1A

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0082

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0241
 0.29

Most Highly Correlated Transcripts

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9721

bd439

(bd439) POLBc_alpha
0.9644

bd843

(bd843) NA
0.9606

bd1214

(bd1214) KISc_C_terminal
0.9603

bd950

(bd950) NA
0.9474

10156

Tcp10_C superfamily
0.9418

bd529

(bd529) SNF2_N
0.9391

bd1081

(bd1081) NA
0.9345

bd890

(bd890) NA
0.9285

bd1173

(bd1173) S_TKc
0.9239

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CAF1A superfamily Chromatin assembly factor 1 subunit A; The CAF-1 or chromatin assembly factor-1 consists of three... - 73.4182 2.62E-15 1084 - 1127 superfamily 256933
CAF1A superfamily Chromatin assembly factor 1 subunit A; The CAF-1 or chromatin assembly factor-1 consists of three... - 73.4182 2.62E-15 1084 - 1127 superfamily 256933

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48136 PHATRDRAFT_48136 262591 306340 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003910 -

GO:0003910

DNA ligase (ATP) activity

Details: 
Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m).
GO Category: 
MF

Add comment

Log in to post comments