PHATRDRAFT_22622 gtp-binding protein (PRK05433)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_22622 chr_18 gtp-binding protein (PRK05433) 514766 517002 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0150

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LepA LepA also known as Elongation Factor 4 (EF4); LepA (also known as elongation factor 4, EF4) belongs... cl17170 368.014 1.08E-123 91 - 266 specific 206677
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 368.014 1.08E-123 91 - 266 superfamily 266525
lepA_II lepA_II: This subfamily represents the domain II of LepA, a GTP-binding protein localized in the... cl02787 143.749 9.31E-41 277 - 362 specific 239670
Translation_Factor_II_like superfamily Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor... - 143.749 9.31E-41 277 - 362 superfamily 261449
lepA_C lepA_C: This family represents the C-terminal region of LepA, a GTP-binding protein localized in... cl02785 138.779 6.47E-39 497 - 576 specific 239680
Elongation_Factor_C superfamily Elongation factor G C-terminus. This domain includes the carboxyl terminal regions of elongation... - 138.779 6.47E-39 497 - 576 superfamily 261447
LepA_C superfamily GTP-binding protein LepA C-terminus; This family consists of the C-terminal region of several pro-... - 177.016 2.27E-52 584 - 691 superfamily 203441
LepA_C superfamily GTP-binding protein LepA C-terminus; This family consists of the C-terminal region of several pro-... - 177.016 2.27E-52 584 - 691 superfamily 203441
EFG_II superfamily Elongation Factor G, domain II; This domain is found in Elongation Factor G. It shares a similar... - 43.5715 1.38E-05 389 - 461 superfamily 258632
PRK05433 GTP-binding protein LepA; Provisional - 1118.58 0 86 - 693 multi-dom 235462

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
40001 Not available 181961 318170 428578 Cre03.g165000.t1.2 AT5G39900.1 361469

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments