PHATRDRAFT_15102 (COG0390)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_15102	chr_18	(COG0390)	591687	592427	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0394

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0171	0.38	4.9 9300

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG0390		ABC-type uncharacterized transport system, permease component [General function prediction only]	cl00424	147.854	5.16E-43	3 - 239	specific	223467
UPF0014 superfamily		Uncharacterized protein family (UPF0014); Uncharacterised protein family (UPF0014).	-	147.854	5.16E-43	3 - 239	superfamily	241854

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
30400		Not available	192490	188348	467414	Cre16.g673000.t1.2	AT2G37330.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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