PHATRDRAFT_51169 gtp-binding nuclear protein ran (PTZ00132)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_51169	chr_19	gtp-binding nuclear protein ran (PTZ00132)	574976	576436	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0194

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0126	0.29	160 17000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ran		Ras-related nuclear proteins (Ran)/TC4 family of small GTPases; Ran GTPase is involved in diverse...	cl17170	363.16	7.24E-129	7 - 172	specific	206643
Ras_like_GTPase superfamily		Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase...	-	363.16	7.24E-129	7 - 172	superfamily	266525
PTZ00132		GTP-binding nuclear protein Ran; Provisional	-	426.416	4.60E-153	1 - 211	multi-dom	240284

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
39470		Not available	270765	244083	449047	Cre03.g191050.t1.2	AT5G55190.1	288419

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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