PHATRDRAFT_50701 yeast ribosomal protein s28 homologue (Ribosomal_S23)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50701	chr_2	yeast ribosomal protein s28 homologue (Ribosomal_S23)	22139	22570	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0151

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0210	0.20	0.00083 1.9

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ribosomal_S23		S12-like family, 40S ribosomal protein S23 subfamily; S23 is located at the interface of the large...	cl00312	218.678	7.70E-74	26 - 140	specific	239465
Ribosomal_S12_like superfamily		Ribosomal protein S12-like family; composed of prokaryotic 30S ribosomal protein S12, eukaryotic...	-	218.678	7.70E-74	26 - 140	superfamily	241773

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
28209		Not available	273042	244968	434089	Cre12.g504200.t1.2	AT5G02960.1	355273

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments