PHATRDRAFT_25204 phosphoribosylaminoimidazole carboxylase (PLN02948)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_25204	chr_2	phosphoribosylaminoimidazole carboxylase (PLN02948)	293043	294836	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0139

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0230	0.25	25000 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AIRC		AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl)-5-...	cl00310	263.199	1.24E-84	431 - 580	specific	250092
AIRC superfamily		AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl)-5-...	-	263.199	1.24E-84	431 - 580	superfamily	260343
ATP-grasp_4 superfamily		ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent...	-	193.596	5.72E-58	135 - 319	superfamily	266590
PLN02948		phosphoribosylaminoimidazole carboxylase	-	905.586	0	1 - 597	multi-dom	178534

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
13308		Not available	278636	31056	421581	Cre12.g503300.t1.2	AT2G37690.1	510589

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments