PHATRDRAFT_54086 atp synthase beta subunit (PRK09280)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54086 chr_2 atp synthase beta subunit (PRK09280) 349049 350795 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0194

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0229
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
F1-ATPase_beta F1 ATP synthase beta subunit, nucleotide-binding domain. The F-ATPase is found in bacterial plasma... cl17233 578.413 0 98 - 386 specific 238553
RecA-like_NTPases superfamily RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and... - 578.413 0 98 - 386 superfamily 266574
ATP-synt_ab_C superfamily ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta chain, C terminal domain. - 118.914 3.95E-32 394 - 495 superfamily 249758
ATP-synt_ab_C superfamily ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta chain, C terminal domain. - 118.914 3.95E-32 394 - 495 superfamily 249758
ATP-synt_ab_N superfamily ATP synthase alpha/beta family, beta-barrel domain; This family includes the ATP synthase alpha and... - 81.4185 5.65E-19 28 - 96 superfamily 251583
ATP-synt_ab_N superfamily ATP synthase alpha/beta family, beta-barrel domain; This family includes the ATP synthase alpha and... - 81.4185 5.65E-19 28 - 96 superfamily 251583
PRK09280 F0F1 ATP synthase subunit beta; Validated - 965.748 0 26 - 500 multi-dom 236447

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
bd1563 Not available 267742 233619 445169 Cre17.g698000.t1.2 AT5G08680.1 355840

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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