PHATRDRAFT_18197 atp-bindingsub-family c (cftr mrp)member 1 (ABCC_MRP_domain2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_18197 chr_2 atp-bindingsub-family c (cftr mrp)member 1 (ABCC_MRP_domain2) 744638 748677 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0124

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0146
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCC_MRP_domain2 ATP-binding cassette domain 2 of multidrug resistance-associated protein; The ABC subfamily C is... cl17201 342.166 5.36E-109 915 - 1147 specific 213211
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 284.747 1.85E-88 288 - 496 superfamily 266551
ABCC_MRP_domain1 ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C; This... cl17201 284.747 1.85E-88 288 - 496 specific 213217
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 284.747 1.85E-88 288 - 496 superfamily 266551
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 107.764 2.15E-25 14 - 246 superfamily 250039
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 107.764 2.15E-25 14 - 246 superfamily 250039
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 107.764 2.15E-25 14 - 246 superfamily 250039
MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] - 193.414 4.75E-52 3 - 515 multi-dom 224055
MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] - 193.414 4.75E-52 3 - 515 multi-dom 224055

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
bd790 Not available Not available Not available Not available Cre13.g564900.t1.2 Not available 337435

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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