PHATRDRAFT_43574 transducin family protein wd-40 repeat family protein (WD40 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43574 chr_2 transducin family protein wd-40 repeat family protein (WD40 superfamily) 850103 851602 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0200

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0237
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 109.732 4.37E-27 195 - 494 superfamily 238121
NLE superfamily NLE (NUC135) domain; This domain is located N terminal to WD40 repeats. It is found in the... - 45.2058 2.45E-06 41 - 111 superfamily 254635
NLE superfamily NLE (NUC135) domain; This domain is located N terminal to WD40 repeats. It is found in the... - 45.2058 2.45E-06 41 - 111 superfamily 254635
COG2319 FOG: WD40 repeat [General function prediction only] - 80.5179 1.77E-16 156 - 480 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22985 Not available 240159 286493 62524 Cre17.g710100.t1.1 AT5G15550.1 563571

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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