PHATRDRAFT_25394 loc100036868 protein (nop2p)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_25394	chr_2	loc100036868 protein (nop2p)	976636	978219	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0201

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0215	0.22	2500 130000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AdoMet_MTases superfamily		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	-	49.827	3.52E-07	287 - 397	superfamily	266528
nop2p		NOL1/NOP2/sun family putative RNA methylase; [Protein synthesis, tRNA and rRNA base modification].	-	324.42	2.11E-107	247 - 522	multi-dom	188051

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
34006		Not available	226243	318223	197644	Cre06.g273413.t1.1	AT4G26600.1	476935

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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