PHATRDRAFT_49052 peptidase m50 (S2P-M50_like_2)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49052	chr_20	peptidase m50 (S2P-M50_like_2)	436814	437974	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0375

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
S2P-M50_like_2		Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which...	cl10020	90.367	1.40E-21	155 - 286	specific	100081
S2P-M50 superfamily		Site-2 protease (S2P) class of zinc metalloproteases (MEROPS family M50) cleaves transmembrane...	-	90.367	1.40E-21	155 - 286	superfamily	245232
Peptidase_M50		Peptidase family M50; Peptidase family M50.	-	40.5088	0.00025162	174 - 289	multi-dom	251129

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
263277		Not available	188763	158742	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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