PHATRDRAFT_49149 helix-hairpin-helix motif family protein (NT_POLXc)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49149 chr_21 helix-hairpin-helix motif family protein (NT_POLXc) 70398 72420 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0216

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0075
 0.22

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NT_POLXc Nucleotidyltransferase (NT) domain of family X DNA Polymerases; X family polymerases fill in short... cl11966 208.588 5.46E-62 139 - 490 specific 143386
Rel-Spo_like superfamily RelA- and SpoT-like ppGpp Synthetases and Hydrolases, catalytic domain; The Rel-Spo superfamily... - 208.588 5.46E-62 139 - 490 superfamily 264491
POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] - 89.3175 9.89E-20 133 - 490 multi-dom 224709

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 240475 179115 201154 Not available AT1G10520.1 309246

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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