19601 DUF393Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
19601	chr_2	DUF393	1237634	1238323	+	DUF393

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450395	Thaps19601.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0241

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0034	0.54

Most Highly Correlated Transcripts

1175 hypothetical protein 0.902	bd1439 (bd1439) ycf35 0.884	20813 hypothetical protein 0.8796	270004 hypothetical protein 0.8765	7569 hypothetical protein 0.87	262431 Abhydrolase_3 0.87
bd1934 (bd1934) NA 0.8683	263361 CHD 0.8672	261041 ATE_C 0.8663	31757 PLPDE_III_YBL036c_euk 0.865

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF393		Protein of unknown function, DUF393; Members of this family have two highly conserved cysteine...	cl01136	71.9353	2.18E-16	74 - 186	specific	252400
DUF393 superfamily		Protein of unknown function, DUF393; Members of this family have two highly conserved cysteine...	-	71.9353	2.18E-16	74 - 186	superfamily	260807

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	269532	161005	Not available	Cre03.g145587.t1.1	AT5G50100.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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