PHATRDRAFT_40325 (SMK-1 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_40325 chr_23 (SMK-1 superfamily) 112921 121096 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0477

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0099
 0.44

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PKc Catalytic domain of Protein Kinases; Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the... cl09925 105.011 1.85E-24 1571 - 1833 specific 173623
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 105.011 1.85E-24 1571 - 1833 superfamily 263920
SMK-1 superfamily Component of IIS longevity pathway SMK-1; SMK-1 is a component of the IIs longevity pathway which... - 138.472 3.36E-36 511 - 642 superfamily 147119
DUF1777 superfamily Protein of unknown function (DUF1777); This is a family of eukaryotic proteins of unknown function... - 39.8576 0.00172382 1911 - 2008 superfamily 254947
DUF3827 superfamily Domain of unknown function (DUF3827); This family contains the human KIAA1549 protein which has... - 40.3097 0.00556803 1889 - 2204 superfamily 257370
S_TKc Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-... - 101.838 3.50E-23 1558 - 1827 multi-dom 214567

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269314 Not available 209177 179113 467056 Cre17.g701300.t1.2 AT3G06670.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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