PHATRDRAFT_23371 gtp-binding protein (odn superfamily) (PTZ00258)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_23371 chr_23 gtp-binding protein (odn superfamily) (PTZ00258) 293992 295477 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0142

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0246
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YchF YchF GTPase; YchF is a member of the Obg family, which includes four other subfamilies of GTPases:... cl17170 319.405 1.11E-106 30 - 330 specific 206687
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 319.405 1.11E-106 30 - 330 superfamily 266525
TGS_YchF_C TGS_YchF_C: This subfamily represents TGS domain-containing YchF GTP-binding protein, a universally... cl15768 147.336 3.88E-43 332 - 418 specific 133440
TGS superfamily The TGS domain, named after the ThrRS, GTPase, and SpoT/RelA proteins where it occurs, is... - 147.336 3.88E-43 332 - 418 superfamily 265779
PTZ00258 GTP-binding protein; Provisional - 492.153 9.51E-173 3 - 421 multi-dom 240334

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
39710 Not available 260574 320819 422986 Cre02.g083600.t1.2 AT1G30580.1 551993

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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