PHATRDRAFT_7959 myb-like dna-binding domain containing protein (SANT)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_7959	chr_25	myb-like dna-binding domain containing protein (SANT)	349762	350055	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0318

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0002	0.43	470 780

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SANT		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	cl17250	33.3178	0.000762391	5 - 45	specific	238096
SANT superfamily		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	-	33.3178	0.000762391	5 - 45	superfamily	266586
SANT		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	cl17250	33.3178	0.000762391	5 - 45	specific	238096
SANT superfamily		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	-	33.3178	0.000762391	5 - 45	superfamily	266586

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	162574	179414	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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