PHATRDRAFT_16545 methionyl-trna synthetase (tRNA_bind_EMAP-II_like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16545	chr_26	methionyl-trna synthetase (tRNA_bind_EMAP-II_like)	299250	299753	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0177

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0107	0.29	1500 220

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
tRNA_bind_EMAP-II_like		tRNA-binding-domain-containing EMAP2-like proteins. This family contains a diverse fraction of tRNA...	cl00320	163.938	3.51E-52	1 - 103	specific	239198
tRNA_bindingDomain superfamily		The tRNA binding domain is also known as the Myf domain in literature. This domain is found in a...	-	163.938	3.51E-52	1 - 103	superfamily	260352

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Cre03.g145967.t1.1	AT2G40660.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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