PHATRDRAFT_16688 cgi-09 protein (Gcd10p superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16688	chr_28	cgi-09 protein (Gcd10p superfamily)	84167	85496	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0200

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0154	0.20	20000 42000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Gcd10p superfamily		Gcd10p family; eIF-3 is a multi-subunit complex that stimulates translation initiation in vitro at...	-	202.139	3.31E-61	25 - 226	superfamily	252438

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	159386	264737	109824	Cre12.g543100.t1.2	AT2G45730.1	474013

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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