PHATRDRAFT_41252 (OTU)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_41252	chr_28	(OTU)	303861	304882	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0188

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0210	0.20	0.00083 1.9

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
OTU		OTU-like cysteine protease; This family is comprised of a group of predicted cysteine proteases,...	cl19932	89.0632	3.71E-22	72 - 194	specific	251233
OTU superfamily		OTU-like cysteine protease; This family is comprised of a group of predicted cysteine proteases,...	-	89.0632	3.71E-22	72 - 194	superfamily	268285
SEC-C superfamily		SEC-C motif; The SEC-C motif found in the C-terminus of the SecA protein, in the middle of some...	-	47.6876	2.08E-07	189 - 271	superfamily	267742

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
264466		Not available	154542	294765	68494	Cre05.g246050.t1.1	AT5G67170.1	536109

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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