PHATRDRAFT_44042 exonuclease family protein (DnaQ_like_exo superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44042 chr_3 exonuclease family protein (DnaQ_like_exo superfamily) 777343 779079 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0215

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0127
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DnaQ_like_exo superfamily DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like... - 157.647 2.48E-45 291 - 440 superfamily 263941
RecQ5 superfamily RecQ helicase protein-like 5 (RecQ5); This family represents a conserved region approximately 200... - 37.4542 0.00532243 58 - 158 superfamily 148529
zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar); Zinc finger C-x8-C-x5-C-x3-H type (and similar). cl11592 35.2236 0.00541057 18 - 43 specific 250023
zf-CCCH superfamily Zinc finger C-x8-C-x5-C-x3-H type (and similar); Zinc finger C-x8-C-x5-C-x3-H type (and similar). - 35.2236 0.00541057 18 - 43 superfamily 264437
DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA... - 37.5169 0.00457799 291 - 507 multi-dom 223916

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
24849 Not available 179299 63027 Not available Cre01.g036600.t1.2 AT3G50100.1 534662

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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