Phatr_hclust_0215 Hierarchical Clustering
Phaeodactylum tricornutum
| Cluster Plot | Conditions Plot | Dendrogram |
|---|---|---|
 |
 |
 |
| GO ID | Go Term | p-value | q-value | Cluster |
|---|---|---|---|---|
| GO:0000154 | rRNA modification | 0.00838054 | 1 | Phatr_hclust_0215 |
| GO:0006435 | threonyl-tRNA aminoacylation | 0.00838054 | 1 | Phatr_hclust_0215 |
| GO:0019856 | pyrimidine base biosynthesis | 0.012546 | 1 | Phatr_hclust_0215 |
| GO:0006298 | mismatch repair | 0.0249437 | 1 | Phatr_hclust_0215 |
| GO:0006526 | arginine biosynthesis | 0.0290436 | 1 | Phatr_hclust_0215 |
| GO:0006364 | rRNA processing | 0.0331273 | 1 | Phatr_hclust_0215 |
| GO:0000105 | histidine biosynthesis | 0.0371948 | 1 | Phatr_hclust_0215 |
| GO:0006807 | nitrogen compound metabolism | 0.057292 | 1 | Phatr_hclust_0215 |
| GO:0008033 | tRNA processing | 0.0808874 | 1 | Phatr_hclust_0215 |
| GO:0009058 | biosynthesis | 0.173348 | 1 | Phatr_hclust_0215 |
|
PHATRDRAFT_38891 : histidinol-phosphate aminotransferase (PLN03026) |
PHATRDRAFT_21682 : tyw1_oryswybutosine-synthesizing protein 1 homolog (PRK13762) |
PHATRDRAFT_15233 : 5-3 exoribonuclease 2 (XRN_N superfamily) |
|
|
PHATRDRAFT_14149 : rrp8_schpo ribosomal rna-processing protein 8 (AdoMet_MTases superfamily) |
PHATRDRAFT_49719 : coiled-coil domain containing 86 |
PHATRDRAFT_3351 : dimethyladenosine transferase |
PHATRDRAFT_7810 : dead deah box helicase domain protein (SrmB) |
|
PHATRDRAFT_18524 : threonyl-trna synthetase (PLN02908) |
PHATRDRAFT_43822 : ribosomal rna processing 15 homolog (Rrp15p) |
PHATRDRAFT_15516 : myb3r-4 (c-myb-like transcription factor 3r-myb domain protein 3r-4) dna binding transcription factor (SANT) |
|
|
PHATRDRAFT_50527 : nucleolar gtpase atpase p130 (SRP40_C superfamily) |
PHATRDRAFT_47290 : 23s rrna (uracil-5-)-methyltransferase (rumA) |
PHATRDRAFT_15689 : mgc114896 protein (PqqL) |
|
|
PHATRDRAFT_24195 : (CPSaseII_lrg) |
PHATRDRAFT_23306 : vacuolar protein sorting 13b (VacB) |
PHATRDRAFT_44042 : exonuclease family protein (DnaQ_like_exo superfamily) |
PHATRDRAFT_49177 : (NT_PAP_TUTase) |
|
PHATRDRAFT_48672 : (RAP) |
PHATRDRAFT_47345 : trna pseudouridine synthase a (PseudoU_synth superfamily) |
PHATRDRAFT_52346 : mgc88910 protein (Glyco_hydro_47) |
|
|
PHATRDRAFT_16073 : rh26_orysj dead-box atp-dependent rna helicase 26 (DEADc) |
PHATRDRAFT_47420 : mgc148433 protein (APH_ChoK_like superfamily) |
PHATRDRAFT_40779 : multidrug efflux mfs permease (MFS) |
|
|
PHATRDRAFT_50326 : superkiller viralicidic activity 2-like 2 (COG4581) |
PHATRDRAFT_5175 : solute carrier family 25 (mitochondrial carrier ornithine transporter) member 15 (Mito_carr) |
PHATRDRAFT_50084 : glutathione peroxidase (Thioredoxin_like superfamily) |
|
|
PHATRDRAFT_16162 : ribonuclease z (Lactamase_B superfamily) |
| Condition | Condition | Difference | FDR |
|---|---|---|---|
| Re-illuminated_6h | Re-illuminated_6h | -0.382 | 0.0113208 |
| Copper_SH | Copper_SH | 0.430 | 0.000515464 |
| Green_vs_Red_24h | Green_vs_Red_24h | 0.109 | 0.285468 |
| Silver_SH | Silver_SH | 0.052 | 0.519804 |
| Cadmium_1.2mg | Cadmium_1.2mg | -0.097 | 0.0950355 |
| BlueLight_24h | BlueLight_24h | 0.253 | 0.025641 |
| GreenLight_0.5h | GreenLight_0.5h | 0.452 | 0.124565 |
| RedLight_6h | RedLight_6h | -0.573 | 0.000694444 |
| light_16hr_dark_7.5hr | light_16hr_dark_7.5hr | 0.000 | 0.980594 |
| GreenLight_24h | GreenLight_24h | 0.178 | 0.149032 |
| light_6hr | light_6hr | -1.089 | 0.000561798 |
| dark_8hr_light_3hr | dark_8hr_light_3hr | -0.693 | 0.00060241 |
| Blue_vs_Green_6h | Blue_vs_Green_6h | -0.053 | 0.6 |
| Ammonia_SH | Ammonia_SH | 4.176 | 0.000344828 |
| Simazine_SH | Simazine_SH | 0.110 | 0.253307 |
| Oil_SH | Oil_SH | 0.531 | 0.000666667 |
| Salinity_15ppt_SH | Salinity_15ppt_SH | 0.336 | 0.00478261 |
| Cadmium_SH | Cadmium_SH | 0.190 | 0.0595436 |
| Blue_vs_Red_24h | Blue_vs_Red_24h | 0.184 | 0.15604 |
| highlight_0to6h | highlight_0to6h | 0.285 | 0.00211268 |
| BlueLight_0.5h | BlueLight_0.5h | 0.707 | 0.0489796 |
| Dispersant_SH | Dispersant_SH | 0.293 | 0.00852273 |
| light_16hr_dark_4hr | light_16hr_dark_4hr | -0.129 | 0.205576 |
| light_15.5hr | light_15.5hr | -0.160 | 0.466923 |
| light_10.5hr | light_10.5hr | -1.033 | 0.000561798 |
| Dispersed_oil_SH | Dispersed_oil_SH | 0.230 | 0.0196667 |
| Si_free | Si_free | 0.177 | 0.195455 |
| Re-illuminated_0.5h | Re-illuminated_0.5h | 0.614 | 0.0591743 |
| Mixture_SH | Mixture_SH | 3.867 | 0.000357143 |
| Blue_vs_Red_6h | Blue_vs_Red_6h | 0.105 | 0.587405 |
| light_16hr_dark_30min | light_16hr_dark_30min | -0.050 | 0.854492 |
| BlueLight_6h | BlueLight_6h | -0.467 | 0.000581395 |
| highlight_12to48h | highlight_12to48h | 0.589 | 0.000555556 |
| RedLight_24h | RedLight_24h | 0.069 | 0.653826 |
| Dark_treated | Dark_treated | -0.497 | 0.339796 |
| GreenLight_6h | GreenLight_6h | -0.414 | 0.00454545 |
| Cadmium_0.12mg | Cadmium_0.12mg | -0.087 | 0.0104651 |
| Blue_vs_Green_24h | Blue_vs_Green_24h | 0.075 | 0.243711 |
| RedLight_0.5h | RedLight_0.5h | 0.618 | 0.0381098 |
| Green_vs_Red_6h | Green_vs_Red_6h | 0.158 | 0.33027 |
| Re-illuminated_24h | Re-illuminated_24h | 0.338 | 0.000657895 |
