PHATRDRAFT_44096 rna methylase (COG0116)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44096 chr_3 rna methylase (COG0116) 950928 952571 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0141

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0154
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
THUMP_AdoMetMT THUMP domain associated with S-adenosylmethionine-dependent methyltransferases; Proteins of this... cl12076 94.5692 9.84E-23 61 - 229 specific 212584
THUMP superfamily THUMP domain, predicted to bind RNA; The THUMP domain is named after THioUridine synthases, RNA... - 94.5692 9.84E-23 61 - 229 superfamily 264537
AdoMet_MTases superfamily S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases... - 65.7794 1.07E-12 236 - 477 superfamily 266528
COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair] - 181.353 2.76E-51 60 - 478 multi-dom 223194

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
21929 Not available 235462 202718 74188 Cre17.g722250.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments