PHATRDRAFT_33633 dna gyrase subunit a (PRK05560)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_33633 chr_3 dna gyrase subunit a (PRK05560) 1422369 1424825 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0148

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0181
 0.26

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TOP4c superfamily DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC... - 588.767 0 9 - 469 superfamily 238111
TOP4c superfamily DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC... - 588.767 0 9 - 469 superfamily 238111
DNA_gyraseA_C superfamily DNA gyrase C-terminal domain, beta-propeller; This repeat is found as 6 tandem copies at the C-... - 38.6147 0.000594964 611 - 656 superfamily 252298
DNA_gyraseA_C superfamily DNA gyrase C-terminal domain, beta-propeller; This repeat is found as 6 tandem copies at the C-... - 38.6147 0.000594964 611 - 656 superfamily 252298
DNA_gyraseA_C superfamily DNA gyrase C-terminal domain, beta-propeller; This repeat is found as 6 tandem copies at the C-... - 38.6147 0.000594964 611 - 656 superfamily 252298
DNA_gyraseA_C superfamily DNA gyrase C-terminal domain, beta-propeller; This repeat is found as 6 tandem copies at the C-... - 38.6147 0.000594964 611 - 656 superfamily 252298
DNA_gyraseA_C superfamily DNA gyrase C-terminal domain, beta-propeller; This repeat is found as 6 tandem copies at the C-... - 38.6147 0.000594964 611 - 656 superfamily 252298
DNA_gyraseA_C superfamily DNA gyrase C-terminal domain, beta-propeller; This repeat is found as 6 tandem copies at the C-... - 38.6147 0.000594964 611 - 656 superfamily 252298
DNA_gyraseA_C superfamily DNA gyrase C-terminal domain, beta-propeller; This repeat is found as 6 tandem copies at the C-... - 38.6147 0.000594964 611 - 656 superfamily 252298
DNA_gyraseA_C superfamily DNA gyrase C-terminal domain, beta-propeller; This repeat is found as 6 tandem copies at the C-... - 38.6147 0.000594964 611 - 656 superfamily 252298

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
39845 Not available 265863 320393 424104 Cre04.g221650.t1.1 AT3G10690.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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