PHATRDRAFT_50493 (H15)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50493 chr_30 (H15) 204946 209022 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0194

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0191
 0.33

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
H15 linker histone 1 and histone 5 domains; the basic subunit of chromatin is the nucleosome,... cl00073 61.0979 5.01E-11 114 - 188 specific 238028
H15 superfamily linker histone 1 and histone 5 domains; the basic subunit of chromatin is the nucleosome,... - 61.0979 5.01E-11 114 - 188 superfamily 260173
WHIM3 superfamily WSTF, HB1, Itc1p, MBD9 motif 3; A conserved alpha helical motif that along with the WHIM1 and WHIM2... - 38.4487 0.00115617 720 - 754 superfamily 259745
WHIM3 superfamily WSTF, HB1, Itc1p, MBD9 motif 3; A conserved alpha helical motif that along with the WHIM1 and WHIM2... - 38.4487 0.00115617 720 - 754 superfamily 259745
WHIM1 superfamily WSTF, HB1, Itc1p, MBD9 motif 1; A conserved alpha helical motif that along with the WHIM2 and WHIM3... - 38.7555 0.00118578 524 - 573 superfamily 259743
WHIM1 superfamily WSTF, HB1, Itc1p, MBD9 motif 1; A conserved alpha helical motif that along with the WHIM2 and WHIM3... - 38.7555 0.00118578 524 - 573 superfamily 259743

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 277939 100614 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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