PHATRDRAFT_50527 nucleolar gtpase atpase p130 (SRP40_C superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50527	chr_31	nucleolar gtpase atpase p130 (SRP40_C superfamily)	4810	6472	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0215

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0127	0.23	1.1 59

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SRP40_C superfamily		SRP40, C-terminal domain; This presumed domain is found at the C-terminus of the S. cerevisiae...	-	61.9134	3.62E-12	379 - 454	superfamily	191166

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
23336		Not available	251960	2290	Not available	Cre01.g055400.t1.2	Not available	559466

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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