PHATRDRAFT_10824 smt1_orysj cycloartenol-c-24-methyltransferase 1 (24-sterol c-methyltransferase 1) (sterol c-methyltransferase 1) (AdoMet_MTases)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_10824 chr_4 smt1_orysj cycloartenol-c-24-methyltransferase 1 (24-sterol c-methyltransferase 1) (sterol c-... 543336 544250 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0166

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0190
 0.25

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases... cl17173 67.8402 1.35E-14 63 - 162 specific 100107
AdoMet_MTases superfamily S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases... - 67.8402 1.35E-14 63 - 162 superfamily 266528
Sterol_MT_C superfamily Sterol methyltransferase C-terminal; This domain is found to the C-terminus of a methyltransferase... - 64.2199 1.39E-13 241 - 303 superfamily 149521
Methyltransf_31 Methyltransferase domain; This family appears to be have methyltransferase activity. - 65.1359 2.68E-13 60 - 197 multi-dom 258120

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
36203 Not available Not available Not available 432780 Cre12.g500500.t1.1 AT5G13710.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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