36203 (SMT1) Sterol_MT_C superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36203 chr_9 (SMT1) Sterol_MT_C superfamily 1123429 1124690 + Sterol_MT_C superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451008 Thaps36203.1, Thaps36203.2, Thaps36203.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0209

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0118
 0.28

Most Highly Correlated Transcripts

bd258

(bd258) HU
0.9167

bd467

(bd467) Cytochrome_b_N
0.9037

33663

PLN02649
0.9024

bd1318

(bd1318) atpF
0.8998

bd1378

(bd1378) atpI
0.8946

bd598

(bd598) atpG
0.8928

574

PRK05444
0.8906

bd1290

(bd1290) atpH
0.8894

bd672

(bd672) NA
0.8864

bd218

(bd218) Chloroa_b-bind superfamily
0.8858

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sterol_MT_C superfamily Sterol methyltransferase C-terminal; This domain is found to the C-terminus of a methyltransferase... - 74.6203 2.95E-17 272 - 334 superfamily 149521

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10824 PHATRDRAFT_10824 Not available Not available 432780 Cre12.g500500.t1.1 AT5G13710.2 Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0003838 -

GO:0003838

sterol 24-C-methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + 5-alpha-cholest-8,24-dien-3-beta-ol = S-adenosyl-L-homocysteine + 24-methylene-5-alpha-cholest-8-en-3-beta-ol.
GO Category: 
MF

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