PHATRDRAFT_51691 beta 1 subunit of 20s proteasome (proteasome_beta_type_6)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_51691	chr_4	beta 1 subunit of 20s proteasome (proteasome_beta_type_6)	983990	984758	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0183

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0125	0.29	3.9 3700

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
proteasome_beta_type_6		proteasome beta type-6 subunit. The 20S proteasome, multisubunit proteolytic complex, is the...	cl00467	294.903	2.20E-101	25 - 207	specific	239731
Ntn_hydrolase superfamily		The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are...	-	294.903	2.20E-101	25 - 207	superfamily	260443
20S_bact_beta		proteasome, beta subunit, bacterial type; Members of this family are the beta subunit of the 20S...	-	56.2543	4.01E-10	24 - 213	multi-dom	163402

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
33649		Not available	273024	304613	432777	Cre06.g279000.t1.2	AT4G31300.3	350003

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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