PHATRDRAFT_41856 plastid transketolase (PLN02790)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_41856 chr_4 plastid transketolase (PLN02790) 1171664 1173658 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0226

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0107
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes... cl01629 321.376 9.08E-105 12 - 268 specific 238970
TPP_enzymes superfamily Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes... - 321.376 9.08E-105 12 - 268 superfamily 261022
TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK... cl11410 166.848 3.11E-48 364 - 526 specific 132916
TPP_enzyme_PYR superfamily Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes; Thiamine... - 166.848 3.11E-48 364 - 526 superfamily 264357
Transketolase_C superfamily Transketolase, C-terminal domain; The C-terminal domain of transketolase has been proposed as a... - 56.0703 1.47E-09 551 - 656 superfamily 251527
Transketolase_C superfamily Transketolase, C-terminal domain; The C-terminal domain of transketolase has been proposed as a... - 56.0703 1.47E-09 551 - 656 superfamily 251527
PLN02790 transketolase - 993.759 0 12 - 664 multi-dom 215424

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
21175 Not available 279206 317336 437959 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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