PHATRDRAFT_11189 translation elongation factor g (PRK00007)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_11189 chr_5 translation elongation factor g (PRK00007) 406067 408329 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0134

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0093
 0.28

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EF-G Elongation factor G (EF-G) family involved in both the elongation and ribosome recycling phases of... cl17170 503.948 9.44E-175 32 - 311 specific 206673
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 503.948 9.44E-175 32 - 311 superfamily 266525
EFG_mtEFG1_IV EFG_mtEFG1_IV: domains similar to domain IV of the bacterial translational elongation factor (EF)... cl02789 203.052 1.41E-61 510 - 630 specific 238715
EFG_like_IV superfamily Elongation Factor G-like domain IV. This family includes the translational elongation factor termed... - 203.052 1.41E-61 510 - 630 superfamily 243187
EFG_mtEFG_II EFG_mtEFG_II: this subfamily represents the domain II of elongation factor G (EF-G) in bacteria and... cl02787 134.923 1.87E-37 337 - 418 specific 239755
Translation_Factor_II_like superfamily Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor... - 134.923 1.87E-37 337 - 418 superfamily 261449
EFG_mtEFG_C EFG_mtEFG_C: domains similar to the C-terminal domain of the bacterial translational elongation... cl02785 119.17 7.98E-32 635 - 712 specific 239683
Elongation_Factor_C superfamily Elongation factor G C-terminus. This domain includes the carboxyl terminal regions of elongation... - 119.17 7.98E-32 635 - 712 superfamily 261447
EFG_II superfamily Elongation Factor G, domain II; This domain is found in Elongation Factor G. It shares a similar... - 147.961 2.71E-42 431 - 504 superfamily 258632
EFG_II superfamily Elongation Factor G, domain II; This domain is found in Elongation Factor G. It shares a similar... - 147.961 2.71E-42 431 - 504 superfamily 258632

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25629 Not available 228774 249422 429015 Cre02.g076250.t1.1 AT1G62750.1 287141

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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