PHATRDRAFT_11271 (Ist1)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11271	chr_5	(Ist1)	960703	961203	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0366

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0114	0.31	20 270

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ist1 superfamily		Regulator of Vps4 activity in the MVB pathway; ESCRT-I, -II, and -III are endosomal sorting...	-	171.567	2.03E-54	5 - 167	superfamily	251922
Ist1 superfamily		Regulator of Vps4 activity in the MVB pathway; ESCRT-I, -II, and -III are endosomal sorting...	-	171.567	2.03E-54	5 - 167	superfamily	251922

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
16695		Not available	220511	236594	363691	Cre10.g435400.t1.2	AT1G34220.2	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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